gov.nih.nci.ncicb.tcga.dcc.bamloader

Class BAMLoaderConstants

java.lang.Object

gov.nih.nci.ncicb.tcga.dcc.bamloader.BAMLoaderConstants

@Component
public class BAMLoaderConstants
extends Object

Constants class for BAM loader

Version:

$Rev$

Author:

Dominique Berton Last updated by: $Author$

Field Summary

Fields

Modifier and Type	Field and Description
static String	ALIQUOT_QUERY
static String	BAM_DELETE
static String	BAM_INSERT
static String	BAM_TO_ALIQUOT_DELETE
static String	BAM_TO_ALIQUOT_INSERT
static String	BAMFilePath
static int	BATCH_SIZE
static String	CENTER_QUERY
static String	DATATYPE_BAM_QUERY
static String	DISEASE_QUERY
static String	EXTENDED_BAM_INSERT
static Boolean	extendedBAMFile
static String	extendedBAMFilePath

Constructor Summary

Constructors

Constructor and Description
BAMLoaderConstants()

Method Summary

Methods

Modifier and Type	Method and Description
static Boolean	getExtendedBAMFile()
static String	getExtendedBAMFilePath()
static Boolean	isExtendedBAMFile()
void	setBAMFilePath(String BAMFilePath)
void	setExtendedBAMFile(Boolean extendedBAMFile)
void	setExtendedBAMFilePath(String extendedBAMFilePath)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

DISEASE_QUERY

public static final String DISEASE_QUERY

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Constant Field Values

CENTER_QUERY

public static final String CENTER_QUERY

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Constant Field Values

DATATYPE_BAM_QUERY

public static final String DATATYPE_BAM_QUERY

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Constant Field Values

ALIQUOT_QUERY

public static final String ALIQUOT_QUERY

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Constant Field Values

BAM_INSERT

public static final String BAM_INSERT

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Constant Field Values

EXTENDED_BAM_INSERT

public static final String EXTENDED_BAM_INSERT

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Constant Field Values

BAM_TO_ALIQUOT_INSERT

public static final String BAM_TO_ALIQUOT_INSERT

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Constant Field Values

BAM_TO_ALIQUOT_DELETE

public static final String BAM_TO_ALIQUOT_DELETE

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Constant Field Values

BAM_DELETE

public static final String BAM_DELETE

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Constant Field Values

BATCH_SIZE

public static final int BATCH_SIZE

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Constant Field Values

BAMFilePath

public static String BAMFilePath

extendedBAMFilePath

public static String extendedBAMFilePath

extendedBAMFile

public static Boolean extendedBAMFile

Constructor Detail

BAMLoaderConstants

public BAMLoaderConstants()

Method Detail

setBAMFilePath

public void setBAMFilePath(String BAMFilePath)

getExtendedBAMFilePath

public static String getExtendedBAMFilePath()

setExtendedBAMFilePath

public void setExtendedBAMFilePath(String extendedBAMFilePath)

isExtendedBAMFile

public static Boolean isExtendedBAMFile()

getExtendedBAMFile

public static Boolean getExtendedBAMFile()

setExtendedBAMFile

public void setExtendedBAMFile(Boolean extendedBAMFile)