Deprecated API

Contents

• Deprecated Interfaces
• Deprecated Classes
• Deprecated Exceptions
• Deprecated Fields
• Deprecated Methods

Deprecated Interfaces

Interface and Description
gov.nih.nci.ncicb.tcga.dcc.qclive.webservice.client.BiospecimenIdWsQueries
gov.nih.nci.ncicb.tcga.dcc.common.generation.FileGenerator This class is no longer used and is being retained for documentation purposes.
gov.nih.nci.ncicb.tcga.dcc.qclive.Messages This class has been deprecated. Message formats are now being maintained in gov.nih.nci.ncicb.tcga.dcc.qclive.common.action.validation.util.MessageFormatType
gov.nih.nci.ncicb.tcga.dcc.qclive.dao.QcLiveShippedBiospecimenQueries
gov.nih.nci.ncicb.tcga.dcc.qclive.soundcheck.RemoteValidationHelper
gov.nih.nci.ncicb.tcga.dcc.qclive.webservice.client.ValidationWebServiceQueries

Deprecated Classes

Class and Description
gov.nih.nci.ncicb.tcga.dcc.common.generation.BcrXMLFileParser This class is no longer used and is being retained for documentation purposes.
gov.nih.nci.ncicb.tcga.dcc.qclive.webservice.client.impl.BiospecimenIdWsQueriesImpl
gov.nih.nci.ncicb.tcga.dcc.common.bean.BioTabDataBean This class is no longer used and is being retained for documentation purposes.
gov.nih.nci.ncicb.tcga.dcc.common.generation.BioTabDataProcessorUtil This class is no longer used and is being retained for documentation purposes.
gov.nih.nci.ncicb.tcga.dcc.common.generation.BioTabFileGenerator This class is no longer used and is being retained for documentation purposes.
gov.nih.nci.ncicb.tcga.dcc.qclive.live.service.BiotabGeneratorJob This class is no longer used and is being retained for documentation purposes.
gov.nih.nci.ncicb.tcga.dcc.qclive.live.service.BiotabSchedulerJob This class is no longer used and is being retained for documentation purposes.
gov.nih.nci.ncicb.tcga.dcc.qclive.common.action.ClinicalDateObscurer This class is no longer used and is being retained for documentation purposes.
gov.nih.nci.ncicb.tcga.dcc.qclive.dao.remote.ExperimentQueriesRemoteImpl
gov.nih.nci.ncicb.tcga.dcc.qclive.dao.jdbc.RemoteCenterQueries
gov.nih.nci.ncicb.tcga.dcc.qclive.dao.remote.RemoteCodeTableQueries
gov.nih.nci.ncicb.tcga.dcc.qclive.common.action.validation.remote.RemoteDomainNameValidator
gov.nih.nci.ncicb.tcga.dcc.qclive.common.action.validation.remote.RemotePlatformValidator
gov.nih.nci.ncicb.tcga.dcc.qclive.common.action.validation.remote.RemoteTumorTypeValidator
gov.nih.nci.ncicb.tcga.dcc.qclive.soundcheck.RemoteValidationHelperCaCoreImpl
gov.nih.nci.ncicb.tcga.dcc.qclive.webservice.client.impl.ShippedBiospecimenWSQueriesImpl
gov.nih.nci.ncicb.tcga.dcc.qclive.soundcheck.Soundcheck
gov.nih.nci.ncicb.tcga.dcc.qclive.webservice.client.impl.ValidationWebServiceQueriesImpl

Deprecated Exceptions

Exceptions and Description
gov.nih.nci.ncicb.tcga.dcc.common.generation.FileGeneratorException This class is no longer used and is being retained for documentation purposes.

Deprecated Fields

Field and Description
gov.nih.nci.ncicb.tcga.dcc.ConstantValues.ARCHIVE_EXTENSION

Deprecated Methods

Method and Description
gov.nih.nci.ncicb.tcga.dcc.common.dao.CenterQueries.getAllCenters()
gov.nih.nci.ncicb.tcga.dcc.common.dao.jdbc.CenterQueriesJDBCImpl.getAllCenters()
gov.nih.nci.ncicb.tcga.dcc.qclive.dao.jdbc.RemoteCenterQueries.getAllCenters()
gov.nih.nci.ncicb.tcga.dcc.common.dao.BaseQueriesProcessor.getNextSequenceNumberAsInteger(String)
gov.nih.nci.ncicb.tcga.dcc.common.dao.BaseQueriesProcessor.getObjectIdByNameAsInteger(String, String, String, String)
gov.nih.nci.ncicb.tcga.dcc.qclive.bean.GenCount.setCount(String)
gov.nih.nci.ncicb.tcga.dcc.common.security.impl.SecurityFilterResponseWrapper.setStatus(int, String)